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16/06/2008
- Cellvizio demonstrated live during ERCP at the 26th Gastroenterology and Endotherapy Workshop
Dr Giovannini (Institut Paoli-Calmettes, Marseille) and PD Dr Meining (Technical University Munich) performed a live demonstration of real time stricture characterization with Cellvizio during ERCP.
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Ph.D. Theses |
2008 |
Vercauteren, T. (2008). Image Registration and Mosaicing for Dynamic In Vivo Fibered Confocal Microscopy. Ph.D. thesis, École Nationale Supérieure des Mines de Paris, Paris.  |
Magazine Articles |
2007 |
Vercauteren, T., Perchant, A., & Ayache, N. (2007). In Vivo Microscopy for Real-Time Structural and Functional Cellular Imaging. ERCIM News, 69, 34–35.  |
Peer-reviewed Publications |
2007 |
Becker, V., Vercauteren, T., von Weyern, C. H., Prinz, C., Schmid, R. M., & Meining, A. (2007). High Resolution Miniprobe-based Confocal Microscopy in Combination with Video-mosaicing. Gastrointestinal Endoscopy, 66(5), 1001–1007. Notes: PMID: 17767932.  |
| Linguraru, M. G., Vercauteren, T., Reyes-Aguirre, M., Gonzalez Ballester, M. A., & Ayache, N. (2007). Segmentation Propagation from Deformable Atlases for Brain Mapping and Analysis. Brain Research Journal, 1(4). |
| Thiberville, L., Moreno-Swirc, S., Vercauteren, T., Peltier, E., Cavé, C., & Bourg Heckly, G. (2007). In Vivo Imaging of the Bronchial Wall Microstructure Using Fibered Confocal Fluorescence Microscopy. American Journal of Respiratory and Critical Care Medicine, 175(1), 22–31. Notes: PMID: 17023733. Chosen for the cover of the AJRCCM paper issue. |
2006 |
| Vercauteren, T., Perchant, A., Malandain, G., Pennec, X., & Ayache, N. (2006). Robust Mosaicing with Correction of Motion Distortions and Tissue Deformation for In Vivo Fibered Microscopy. Medical Image Analysis, 10(5), 673–692. Notes: PMID: 16887375. Annual MedIA/MICCAI Best Paper Award 2006. |
Conference Proceedings |
2008 |
| Vercauteren, T., Meining, A., Lacombe, F., & Perchant, A. (2008). Real Time Autonomous Video Image Registration for Endomicroscopy: Fighting The Compromises. In J. - A. Conchello, C. J. Cogswell, & T. Wilson (Eds.), Proc. SPIE BIOS - Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XV (Vol. 6861, 68610C). San Jose, CA, USA: SPIE. |
| Vercauteren, T., Pennec, X., Perchant, A., & Ayache, N. (2008). Symmetric Log-Domain Diffeomorphic Registration: A Demons-based Approach. Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI'08). New York, USA: Springer-Verlag. (Lecture Notes in Computer Science.) |
| Yeo, B. T. T., Sabuncu, M., Vercauteren, T., Ayache, N., Fischl, B., & Golland, P. (2008). Spherical Demons: Fast Surface Registration. Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI'08). New York, USA: Springer-Verlag. (Lecture Notes in Computer Science.) |
| Yeo, B. T. T., Vercauteren, T., Fillard, P., Pennec, X., Golland, P., Ayache, N., et al. (2008). DTI Registration with Exact Finite-Strain Differential. Proceedings of the IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08) (pp. 700–703). Paris, France: IEEE. |
2007 |
| Perchant, A., Vercauteren, T., Oberrietter, F., Savoire, N., & Ayache, N. (2007). Region Tracking Algorithms on Laser Scanning Devices Applied to Cell Traffic Analysis. Proceedings of the IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'07) (pp. 260–263). Arlington, USA. |
| Vercauteren, T., Pennec, X., Malis, E., Perchant, A., & Ayache, N. (2007). Insight Into Efficient Image Registration Techniques and the Demons Algorithm. In N. Karssemeijer, & B. P. F. Lelieveldt (Eds.), Proceedings of Information Processing in Medical Imaging (IPMI'07) (pp. 495–506). Kerkrade, The Netherlands: Springer-Verlag. (Lecture Notes in Computer Science 4584.) Notes: PMID: 17633724. |
| Vercauteren, T., Pennec, X., Perchant, A., & Ayache, N. (2007). Non-parametric Diffeomorphic Image Registration with the Demons Algorithm. In N. Ayache, S. Ourselin, & A. J. Maeder (Eds.), Proceedings of the 10th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'07) (pp. 319–326). Brisbane, Australia: Springer-Verlag. (Lecture Notes in Computer Science 4792.) Notes: PMID: 18044584. |
2006 |
| Ayache, N., Vercauteren, T., Malandain, G., Oberrietter, F., Savoire, N., & Perchant, A. (2006). Processing and Mosaicing of Fibered Confocal Images. MICCAI Workshop on Microscopic Image Analysis with Applications in Biology (MIAAB'06). Notes: Invited. |
2005 |
| Vercauteren, T., Perchant, A., Pennec, X., & Ayache, N. (2005). Mosaicing of Confocal Microscopic In Vivo Soft Tissue Video Sequences. In J. S. Duncan, & G. Gerig (Eds.), Proceedings of the 8th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'05) (pp. 753–760). Springer-Verlag. (Lecture Notes in Computer Science 3749.) Notes: PMID: 16685914. |
2004 |
| Le Goualher, G., Perchant, A., Genet, M., Cavé, C., Viellerobe, B., Berier, F., et al. (2004). Towards Optical Biopsies with an Integrated Fibered Confocal Fluorescence Microscope. In C. Barillot, D. R. Haynor, & P. Hellier (Eds.), Proceedings of the 7th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'04) (pp. 761–768). Springer-Verlag. (Lecture Notes in Computer Science 3217.) |
| Perchant, A., Le Goualher, G., Genet, M., Viellerobe, B., & Berier, F. (2004). An integrated fibered confocal microscopy system for in vivo and in situ fluorescence imaging: Applications to endoscopy in small animal imaging. Proceedings of the IEEE International Symposium on Biomedical Imaging: Nano to Macro (ISBI'04) (Vol. 1, pp. 692–695). |
| Savoire, N., Le Goualher, G., Perchant, A., Lacombe, F., Malandain, G., & Ayache, N. (2004). Measuring Blood Cells Velocity in Microvessels from a Single Image: Application to In Vivo and In Situ Confocal Microscopy. Proceedings of the IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04) (pp. 456–459). |
Book Contributions |
2008 |
| Linguraru, M. G., Vercauteren, T., Reyes-Aguirre, M., Gonzalez Ballester, M. A., & Ayache, N. (2008). Intensity-free Segmentation of Brain Internal Nuclei from Deformable Atlases. Brain Mapping Research Trends. New York: Nova Science Publishers. Notes: Invited – To appear. |
| Vercauteren, T., Ayache, N., Savoire, N., Malandain, G., & Perchant, A. (2008). Processing of In Vivo Fibered Confocal Microscopy Video Sequences. In J. Rittscher, R. Machiraju, & S. T. C. Wong (Eds.), Microscopic Image Analysis for Life Science Applications. Artech House. Notes: Approximatively 30 pages – To Appear. |
Abstracts |
2007 |
| Becker, V., Vercauteren, T., von Weyern, C. H., Prinz, C., Schmid, R. M., & Meining, A. (2007). Ultra-hochauflösende, sondenbasierte, konfokale Lasermikroskopie in Kombination mit Videomosaicing. 62. Jahrestagung der Deutschen Gesellschaft für Verdauungs- und Stoffwechselkrankheiten. Bochum, Germany. (Zeitschrift für Gastroenterologie 45(8).) |
| Vercauteren, T., Osdoit, A., Perchant, A., & Loiseau, S. (2007). Mosaicing of Confocal Microscopic Video Sequences: Larger Field of View and still Higher Resolution. Proceedings of the Digestive Disease Week (DDW'07) (352). Washington, DC. Notes: Abstract only. |
2006 |
| Lin, K. Y., Maricevich, M. A., Perchant, A., Loiseau, S., Weissleder, R., & Mahmood, U. (2006). Novel Imaging Method and Morphometric Analyses of Microvasculature in Live Mice Using a Fiber-optic Confocal Laser Microprobe. Proceedings of the Radiological Society of North America (RSNA'06). Chicago, Il, USA. |
| Perchant, A., Vercauteren, T., Cavé, C., & Loiseau, S. (2006). Mosaicing of Confocal Microscopic In Vivo Soft Tissue Video Sequences Improves Multimodality Approach. Proceedings of the Radiological Society of North America (RSNA'06). Chicago, Illinois. Notes: Abstract only. |
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Peer-reviewed Publications |
2007 |
| Jean, F., Bourg-Heckly, G., & Viellerobe, B. (2007). Fibered Confocal Spectroscopy and Multicolor Imaging System for In Vivo Fluorescence Analysis. Optics Express, 15(7), 4008–4017. |
| Lelek, M., Suran, E., Louradour, F., Barthelemy, A., Viellerobe, B., & Lacombe, F. (2007). Coherent femtosecond pulse shaping for the optimization of a non-linear micro-endoscope. Opt. Express, 15(16), 10154–10162. |
Conference Proceedings |
2006 |
| Chenegros, G., Mugnier, L. M., Lacombe, F., & Glanc, M. (2006). 3D deconvolution of adaptive-optics corrected retinal images. Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XIII (Vol. 6090, 60900). SPIE. |
| Glanc, M., Lafaille, D., Puget, P., Lacombe, F., Vabre, L., Levecq, X., et al. (2006). Full-field AO-assisted OCT for high-resolution tomographic imaging of the retina. Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine X (Vol. 6079, 607923). SPIE. |
| Gruppetta, S., Lacombe, F., & Puget, P. (2006). Study of the dynamic tear film aberrations using a curvature sensing setup. In F. Manns, P. G. Soderberg, & A. Ho (Eds.), Ophthalmic Technologies XVI (Vol. 6138, 61380w). SPIE. |
| Lacombe, F., Glanc, M., Gargasson, J. L., Bellmann, C., Paques, M., & Sahel, J. (2006). Direct measurements of blood cells density and velocity in retinal micro vessels. Ophthalmic Technologies XVI (Vol. 6138, 61381). SPIE. |
| Lelek, M., Louradour, F., Barthelemy, A., Viellerobe, B., & Lacombe, F. (2006). Two-Photon Fluorescence Microendoscope Using a Flexible Multicore Image Guide. Conference on Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference and Photonic Applications Systems Technologies (Cmr5). Optical Society of America. (Technical Digest (CD).) |
| Osdoit, A., Genet, M., Perchant, A., Loiseau, S., Abrat, B., & Lacombe, F. (2006). In vivo fibered confocal reflectance imaging: totally non-invasive morphological cellular imaging brought to the endoscopist. In G. J. Tearney, & T. D. Wang (Eds.), Endoscopic Microscopy (Vol. 6082, pp. 608208–608210). San Jose, CA, USA: SPIE. |
| Viellerobe, B., Osdoit, A., Cave, C., Lacombe, F., Loiseau, S., & Abrat, B. (2006). Mauna Kea technologies' F400 prototype: a new tool for in vivo microscopic imaging during endoscopy. In G. J. Tearney, & T. D. Wang (Eds.), Endoscopic Microscopy (Vol. 6082, 60820c). SPIE. |
2004 |
| Le Goualher, G., Perchant, A., Genet, M., Cavé, C., Viellerobe, B., Berier, F., et al. (2004). Towards Optical Biopsies with an Integrated Fibered Confocal Fluorescence Microscope. In C. Barillot, D. R. Haynor, & P. Hellier (Eds.), Proceedings of the 7th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'04) (pp. 761–768). Springer-Verlag. (Lecture Notes in Computer Science 3217.) |
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